Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDEETLLERGYRKYRGADVDIYFNTNVCEHSGNCVKGNVELFNLDR-KPW-I---MPDN-VSKEEAKRVIHTCPSGALQYIEK
1SJ1 Chain:A ((2-65))
------------------WKVSVDQDTCIGDAICASLCPDVFEMNDEGKAQPKVEVIEDEELYNCAKEAMEACPVSAITIEE-
General information:
TITO was launched using:
RESULT:
Template:
1SJ1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31845 for 389 contacts (-81.9/contact) +
2D Compatibility (PS) -6207 + (NN) -2909 + (LL) 1184
1D Compatibility (HY) -1600 + (ID) 450
Total energy: -41827.0 ( -107.52 by residue)
QMean score : 0.575
(partial model without unconserved sides chains):
PDB file :
Tito_1SJ1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SJ1-query.scw
PDB file :
Tito_Scwrl_1SJ1.pdb
: