Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFLLVAVISVFALVLTACGGSGASSDKANGSGKAKDGGSLIIGVTGDPEVINPNYASDRVTLTIQQAVYAPLFWE-----------VDGKPALAKSLDISDDNLTYTVKLKDGLTWHDGKPLTADDVVFTVNSIL----DTKQNSPNRGNFVFD-DKPVKVEAVDDTTVKFTLPTVAPAFENTIKTFFP------IPKHIFEGVENIEKSDKNKNPIGSGPYKFVEYKTGEYVSLERFNDYFDGKPKLDKVTFRITKDQNAANLALQNGEIN-LKSIQPSDRNKVEKASAVNIITYPENRLSYATFNENQPALKSKELRQALSYALDREEIIDAAYGSDEYAKPASSFLTENTKYFTDKVETYDQDIAKAKKLVKESGFDTSQKLTVYYLNNSKSQESIALYLQ-QQYKEIGVTLDLKPTDPNALS--NITLDRKNADYSIALNGYIMGNDPDAYKSLYLSDAP-----YNYSNYHNKDLDALWEKGAVTADDKERQEIYEKIQNTIADDAVIYPISYDNAVLALDSRYGGQKAATPQPVTMFRDLSKLYLTE |
| 4RA1 Chain:A ((6-456)) | ----------------------------------------ALRLGVNGLPNSLEPVNAISNVGPRIVNQIFDTLIARDFFAKGAPGNAIDLVPALAESWERIDEK-SVRFKLRQKVMFHDGVELTADDVAYTFSSERLWGPEAIKKIPLGKSYSLDFDEPV-VE--DKYTV--TLRTKTPSY--LIETFVASWMSRIVPKEYYKKLGAVDFGNK---PVGTGPYKFVEFVAGDRVVLEANDAYWGPKPTASKITYQIVAEPATRVAGLISGEYDIITTLTPDDIQLINSYPDLETRGTLIENFHMFTFNMNQEVFKDKKLRRALALAVNRPIMVEALW-KKQASIPAGFNFPNYGETFDPKRKAMEYNVEEAKRLVKESGYDGT-PITYHTMGNYYANAMPALMMMIEMWKQIGVNVVMKTYAPGSFPPDNQTWMRNWS------NGQWMT---DAYATIVPEFGPNGQVQKRWGWKAPAEFNELCQKVTVLPNGKERFDAYNRMRDIFEEEA------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RA1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26687 for 3277 contacts (-8.1/contact) +
2D Compatibility (PS) -45309 + (NN) -17847 + (LL) 5548
1D Compatibility (HY) -27200 + (ID) 6450
Total energy: -117945.0 ( -35.99 by residue)
QMean score : 0.381
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