Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEIKVKEATLAKYATKLESKGKSTEYL--PMK--GGNMS-YSQANSINHFRTALFDLVDAVDNFQGVVGTDAKRLKELGASFTRKDQELERSMGLGGK
3GWK Chain:C ((3-97))
MSQIKLTPEELRSSAQKYTAGSQQVTEVLNLLTQEQAVIDENWDGSTFDSFEAQFNELSPKITEFAQLLEDINQQLLKVADIIEQTDADIASQIS----
General information:
TITO was launched using:
RESULT:
Template:
3GWK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1720 for 483 contacts (3.6/contact) +
2D Compatibility (PS) -9209 + (NN) -1129 + (LL) -104
1D Compatibility (HY) -6400 + (ID) 600
Total energy: -15722.0 ( -32.55 by residue)
QMean score : 0.268
(partial model without unconserved sides chains):
PDB file :
Tito_3GWK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GWK-query.scw
PDB file :
Tito_Scwrl_3GWK.pdb
: