Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPTKNHRLPKKHLPIRKSTTRFTKGVVTVSRIDIGEIQTFAYQLHTANEAARKSIKDIKNAVKNYTEDGSLKGKAIDASKNYYQMTYFPLCDAIIEAMNESEERLAQYIADFHAQVDSSADARIDADGLYELGKMIDRIEAKKEALAQRMNTGTEGQMQSYRSQLSIAYKQENILEKYLA-----FEQSHGGFFDNLTDLVRGIQQTIRELQSNIQFNSKTGTYDMSKLNFTTVTRMQNASGKALNDNAKTFNFDEYQKTYRGQMWVLMKNGIVDVEATNAYNAAVLGGEMPHESNEAQEEAELLQAVVQSVKEGTDPVTGQEISKAQGFGIISGLIFRYTAGGYKGKKFKIPRDWLHRRKKNNGVEVGTDFGKIGKLVNHPNIKINWSEYAEHGMSRLKQRGLSKSQVDDFVEHGKVLSQNEGEKFAFITEDGVAIVSKDGKLVTAWGKKDFDEGMKKIIGKLYGK |
| 5BNY Chain:B ((66-171)) | -----------------------------------------------------------------------------------------------------------------------------------VGHEFSNLERRIDNLNKRMEDGFL-DVWTYNAELLVLLENERTLDLHDANVKNLHEKVRSQLRDNANDLGNGCFEFWHKCNNECMESVKNGTYDYPKYQKESRLNRQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5BNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12201 for 491 contacts (24.8/contact) +
2D Compatibility (PS) -10493 + (NN) -18 + (LL) 21716
1D Compatibility (HY) -3200 + (ID) 1200
Total energy: 19006.0 ( 38.71 by residue)
QMean score : 0.192
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