Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNNIDSIMSKYNKQQVSKIKDFLLSEIDSDNIEETIDFVKSNNQEKMGKFQDILYDGGIYSGLFIEGNQYLISSSNRKVLIIDAVSEENGVDKELTRIECSLEDFTFLLRNIKDVLRYEEF |
1VL5 Chain:A ((210-244)) | --------------------------VTTEKKQELSDFIKSKPTEYYQKFKIVVEDGRVYS------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VL5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 45 for 163 contacts (0.3/contact) +
2D Compatibility (PS) -3818 + (NN) -1545 + (LL) 6572
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -1746.0 ( -10.71 by residue)
QMean score : 0.416
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