Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKASEHFFYVLKCSDNSYYG----GYTTDVLRREAEHNAGIRCKYTKTRRPVKVIHFEKFETRSEATKAEAAFKKLSRKNKDAYLIQREEESE
3IKT Chain:A ((49-82))
---------------DLSYFGSYGTGYTVPVLKRELRHILGLNRKW------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3IKT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2780 for 108 contacts (25.7/contact) +
2D Compatibility (PS) -3005 + (NN) -1301 + (LL) 5684
1D Compatibility (HY) -2400 + (ID) 700
Total energy: 1058.0 ( 9.80 by residue)
QMean score : 0.120
(partial model without unconserved sides chains):
PDB file :
Tito_3IKT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IKT-query.scw
PDB file :
Tito_Scwrl_3IKT.pdb
: