Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VIKSQKSFSGTSQGALYLVPTPIGNLEDMTFRAIRMLKEADIIAAEDTRNTVKLLNHFEITTRMTSYHQFTKENKEDNIIQRMLGGEVVALVSDAGMPSISDPGYELVQSALDANIPVIPLPGANAALTALIASGLAPQPFYFYGFLPRQNKERTQAIEKLAAREETWILYESPHRLKETLKAIIKITGNDRKIVLCRELTKRFEEFLRGTVEDALNWAMDEEIRGEFCLIIEGNSNPQLAEEQLWWQELDIKTHVSTVMEQENVSSKDAIKTVMKARNLPKREVYSAYHEIK |
| 3FFY Chain:A ((3-112)) | ---------------------------------------------------------------------------------------------------------------------------ATAFVPALVASGLPNEKFCFEGFLP-QKKGRMTKLKSLVDEHRTMVFYESPHRLLKTLTQFAEYFGPERQVSVSREISKIHEETVRGTLSELIEHFTATDPRGEIVIVLAG----------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3FFY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -87726 for 812 contacts (-108.0/contact) +
2D Compatibility (PS) -12153 + (NN) -7617 + (LL) 13116
1D Compatibility (HY) -8400 + (ID) 2100
Total energy: -104880.0 ( -129.16 by residue)
QMean score : 0.586
|
|
|