Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIRRSERLIDMTQFLLSHPRKLVPLTMFAERYGSAKSSISEDLVIIKKTFEDRGIGTLETVPGAAGGVQYISIAGNDDVLDFVHTLCNRIAEPNRLLPGGYLYLSDLLGEPVTLKAIGKILATKF---NNQKIDAIMTVATKGIPIAQAVAEHLSVPFVIVRRDSKVTEGSTVSINYVSGSSKRIEKMELSKRSLAEGSNVVIVDDFMKAGGTINGMKNLLEEFNAHLVGIGVLVESEYAEERLVDDYVSLVKIKNVNMKEKQIEVVDGNYFNS
1ORE Chain:A ((29-158))
--------------------------------------------------------------------------------------------------------ISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLGCVLIRKRGKLP-GPTLWASYSLEYGK--AELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVE--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ORE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97606 for 976 contacts (-100.0/contact) +
2D Compatibility (PS) -13631 + (NN) -4687 + (LL) 10056
1D Compatibility (HY) -13200 + (ID) 1900
Total energy: -120968.0 ( -123.94 by residue)
QMean score : 0.589
(partial model without unconserved sides chains):
PDB file :
Tito_1ORE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ORE-query.scw
PDB file :
Tito_Scwrl_1ORE.pdb
: