Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKIGNVEIKNQVVVAPMAGISNSAFRLTVKEFGAGLVC-------CEMISDKGIAYRNAKTLDMLYIDEKEKPLSLQIFGGEKETLVEAAKFVAENTTADIIDINMGCPVNKIIKCEAGAKWLLDPNKVYDMVAAVVDAVDK--PVTVKMRIGWDE-EHVFAIENALAAERAGAAAVAMHGRTRVQMYEG-SANWDVLRDVKRELKIPFMANGDVRTPEDAKRILEHTGADGVMIGRAALGNPWMIYRTVKFLETGELLLEPEPREKMQTAMLHLNRLVELKGENIAVREFRQHAAYYLKGARGSTRAKVAANQATKQSEMEAILNEFVLQYEEKALAKQD |
| 4YCO Chain:A ((8-247)) | -----------RVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTPSGTLVRVQLLGQFPQWLAENAARAVELGSWGV-DLNCGAPS----GSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAV--QQAGATELVVHGRTKEQGYRAEHIDWQAIGDIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIP-NLSRVVKYNE--------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YCO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129010 for 1922 contacts (-67.1/contact) +
2D Compatibility (PS) -24042 + (NN) -6554 + (LL) 9776
1D Compatibility (HY) -12400 + (ID) 3700
Total energy: -165930.0 ( -86.33 by residue)
QMean score : 0.447
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