Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MICQRCGENKAVIALQQLNELGKVESLYLCENCATDEALSSEKDLVKAMDTFSEVALDFLTLLQKEENTQKEVVCENCQLSFEEFLKTNRVGCPECYSAFEAQLVPIIGRVQNGYKKHIGKVPAEVERAEGVQNEISRLQEKLAKLVKNEEFEEAAVVRDEIKALKAGGEDK |
1E52 Chain:A ((13-56)) | -------------------------------------------------------------------------------------------------------------------------VPMDMS-PKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLR------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1E52.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -2300 for 233 contacts (-9.9/contact) +
2D Compatibility (PS) -4486 + (NN) -1768 + (LL) 9576
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -2528.0 ( -10.85 by residue)
QMean score : 0.664
|
|
|