Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAIAKFFRNVSSEMHKVTWPTRKELLTYT-----VTVVITVVLFALFFMLIDFGIEQIIKLIV
2AKI Chain:Z ((67-116))
--ATVAFAREARTEVRKVIWPTRQETLHTTLIVAAVTAVMSLILWGLDGILV------------
General information:
TITO was launched using:
RESULT:
Template:
2AKI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96284 for 903 contacts (-106.6/contact) +
2D Compatibility (PS) -3722 + (NN) 6645 + (LL) 1520
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -95891.0 ( -106.19 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_2AKI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AKI-query.scw
PDB file :
Tito_Scwrl_2AKI.pdb
: