Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIKSISKSELEVMKIIWDFGRAVQYADVAGKLEE--KNYSWKKNTVLTFLTRLVEKNLLSVKKVGRKNEYYALVSENEYLERQTETFVEEIYEGDVKGLITNLVQNDLISPDELEDLQQFWKRMKSPNE
2D45 Chain:A ((8-117))
-----ISSAEWEVMNIIW----MKKYASANNIIEEIQMQKDWSPKTIRTLITRLYKKGFIDRKKDNKIFQYYSLVEESDIKYKTSKNFINKVYKGGFNSLVLNFVEKEDLSQDEIEELR-----------
General information:
TITO was launched using:
RESULT:
Template:
2D45.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47056 for 654 contacts (-72.0/contact) +
2D Compatibility (PS) -11427 + (NN) -306 + (LL) 1276
1D Compatibility (HY) -10400 + (ID) 1900
Total energy: -69813.0 ( -106.75 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_2D45.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2D45-query.scw
PDB file :
Tito_Scwrl_2D45.pdb
: