Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIQIVTVGKLKEKYLVQGIAEYLKRLSAYAKVTIVEVPDEKAPEVLSDAEMKQVKDKEGARILAKIPDDAYVIALAIDGKMKSSEEFAADLDKLATYGKSKVTFVIGGSLGLSEAVLKRSNERISFGRLTLPHQLMRLVLVEQVYRAFRIVRGEPYHK
1O6D Chain:A ((1-147))
LRVRIAVIGKL-DGFIKEGIKHYEKFLRRFCKPEVLEIKR------VHRGSIEEIVRKETEDLTNRILPGSFVMVMDKRGEEVSSEEFADFLKDLEMKGKD-ITILIGGPYGLNEEIFAKAHRVFSLSKMTFTHGMTVLIVLEQIFRAFKIIHGE----
General information:
TITO was launched using:
RESULT:
Template:
1O6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105694 for 1127 contacts (-93.8/contact) +
2D Compatibility (PS) -16237 + (NN) -7493 + (LL) 656
1D Compatibility (HY) -15600 + (ID) 2250
Total energy: -146618.0 ( -130.10 by residue)
QMean score : 0.694
(partial model without unconserved sides chains):
PDB file :
Tito_1O6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O6D-query.scw
PDB file :
Tito_Scwrl_1O6D.pdb
: