Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNTTIQQLVKHVSVREFKNERLSDETKQHLLTAARSASSSHFVQSFSILEITDEKLRKELAEITNSASYVNQTGTFYVFVGDLYRQSKLLLENNRTLDGLRNMESLLVSVIDATIAAQNMVIAAESLDLGICYIG--GIRNDIGKVAELLNLPPFTIPVFGLTVGVPEYKNQVKPRLLLENQVGENQYPHEQFTDLKAYEELTKDYYALREKNQHQTSWGDKNVEFFEEIRRPEIASFLKKQGFTLD
3M5K Chain:A ((6-159))
-NQTLETILNRKSVRKYKDRPVEKEKIDKLIRAGMAAPSSRDRRPWEFIIVTDRKALDTMAEGLPFARMLKETRQAIVVCGDTIKSSNAWF-------------------LDCSAASQNLLLAAESMGLGAVWTAVYPYPDRIEIVRKELRLPDHIMPLNVIPVGYPMQKETPK-------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3M5K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101545 for 1183 contacts (-85.8/contact) +
2D Compatibility (PS) -17011 + (NN) -10501 + (LL) 6460
1D Compatibility (HY) -9600 + (ID) 2200
Total energy: -134397.0 ( -113.61 by residue)
QMean score : 0.652
(partial model without unconserved sides chains):
PDB file :
Tito_3M5K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3M5K-query.scw
PDB file :
Tito_Scwrl_3M5K.pdb
: