Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRAELAVYFIAGTQDIVRGTLPSVLEEALKGGITCFQYREKGAGSLQTASERKEMALECQKLCAKYQVPFIINDDVALALEIGADGIHVGQTDEAIRQVIASCSGKMKIGLSVHSVSEAKEAERLGAVDYIGVGPIFPTISKADAEPVSGTAILEEIRRAGITIPIVGIGGINETNSAEVLTAGADGVSVISAITQSDDCHSVIKQLKNPGSPS
1G4S Chain:A ((13-216))
MKELLSVYFIMGSNN-TKADPVTVVQKALKGGATLYQFREKGGDAL-TGEARIKFAEKAQAACREAGVPFIVNDDVELALNLKADGIHIGQEDANAKEVRAAI-GDMILGVAAHTMSEVKQAEEDGA-DYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFR------
General information:
TITO was launched using:
RESULT:
Template:
1G4S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136065 for 1741 contacts (-78.2/contact) +
2D Compatibility (PS) -22941 + (NN) -16216 + (LL) -100
1D Compatibility (HY) -15200 + (ID) 5000
Total energy: -195522.0 ( -112.30 by residue)
QMean score : 0.715
(partial model without unconserved sides chains):
PDB file :
Tito_1G4S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G4S-query.scw
PDB file :
Tito_Scwrl_1G4S.pdb
: