Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LRKLDFSYNNANYNAEFLMKILTTLKDITKVEQFTIEIIDAVPNDQEQFKEEKGLFSKEVFDFNNLVKESHGIKIDFKEITNILKQCRTVWELSMLVVTSENELNDSGKVLCEVELIEGDLFAILYSEDFNIDLFLEKFSTDEITIEG
2RHH Chain:A ((160-241))
-----------------------------------LEIVDKNTPMLEAFREADNVLRQGVQGISDLIATPGLINLDFADVKTIMSNKGSAL-MGIGIATGENRAAEAAKKAISSPLLE------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2RHH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5945 for 406 contacts (-14.6/contact) +
2D Compatibility (PS) -8481 + (NN) -1317 + (LL) 5136
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -16707.0 ( -41.15 by residue)
QMean score : 0.211
(partial model without unconserved sides chains):
PDB file :
Tito_2RHH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RHH-query.scw
PDB file :
Tito_Scwrl_2RHH.pdb
: