Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKTWEEFLKQEAKQPYFIELMEAVKDARAKG-NVYPSEEDMFSCFRLCPYNQVKVVILGQDPYHGPGQAHGLSFSVQKDVRIPPSLRNIYKELKTDL-DIEPADHGYLAKWAEQGVLLMNTSWSVEEGKAGSHKKLGWATFTDHVLEELNNYDKPLVFILWGNHAIKAASGITNPQHLIIKGVHPSPLAASRGFFGSKPFSKTNAFLEEHERKPIDWDLNEQ
2EUG Chain:A ((6-220))
---TWHDVLAEEKQQPHFLNTLQTVASERQSGVTIYPPQKDVFNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPGFTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQHGETPIDW-----
General information:
TITO was launched using:
RESULT:
Template:
2EUG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114862 for 1721 contacts (-66.7/contact) +
2D Compatibility (PS) -23027 + (NN) -14271 + (LL) 708
1D Compatibility (HY) -22000 + (ID) 5350
Total energy: -178802.0 ( -103.89 by residue)
QMean score : 0.697
(partial model without unconserved sides chains):
PDB file :
Tito_2EUG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EUG-query.scw
PDB file :
Tito_Scwrl_2EUG.pdb
: