Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRQTEFTLLIVGASLSILTFLGAMLYTIIFGLNTLMVADTFGYYSSSEETILLGIITFFSVVAAFFALGSAVFGFIGAFKVKSDGPKVKTLGVCFIVLGGLQVFTIHGILFLIAGILTIT--KKEYKTNSKEDEGTKWE
1KUP Chain:B ((1-25))
-------------------------------------------------------------------------------------------------------------------KLLITIHDRKEFAKFEEERARAKWD
General information:
TITO was launched using:
RESULT:
Template:
1KUP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12961 for 97 contacts (133.6/contact) +
2D Compatibility (PS) -2333 + (NN) -100 + (LL) 9844
1D Compatibility (HY) -1200 + (ID) 300
Total energy: 18872.0 ( 194.56 by residue)
QMean score : 0.347
(partial model without unconserved sides chains):
PDB file :
Tito_1KUP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KUP-query.scw
PDB file :
Tito_Scwrl_1KUP.pdb
: