Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFTSYFLTFEDGARLEIMSRTDVTGKTTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEITW
1XQA Chain:A ((4-113))
--IKHLNLTVADVVAAREFLEKYFGLTCSG-----TRGNAFAVMRDNDGFILTLMKGKEVQYPKT------FHVGFPQESEEQVDKINQRLKEDGFLV--EPPKHA-A-YTFYVEAPGGFTIEVMC
General information:
TITO was launched using:
RESULT:
Template:
1XQA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50779 for 764 contacts (-66.5/contact) +
2D Compatibility (PS) -12011 + (NN) -6224 + (LL) 628
1D Compatibility (HY) -7600 + (ID) 1600
Total energy: -77586.0 ( -101.55 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_1XQA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XQA-query.scw
PDB file :
Tito_Scwrl_1XQA.pdb
: