Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRKIIAVTACATGVAHTYMAAQALKKGA--KKMGNLIKVETQGATGIENELTEKDVNIGEVVIFAVDTKVRNKERFDGKVVLEVPVSAPIKDAEKVINAALALIDEK
4TN5 Chain:A ((4-97))
----LVAVTACVSGVAHTYMAAERLEKLCLLEKWG--VSIETQGALGTENRLADEDIRRADVALLITDIELAGAERFEHCRYVQCSIYAFLREPQRVMSA--------
General information:
TITO was launched using:
RESULT:
Template:
4TN5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8715 for 649 contacts (-13.4/contact) +
2D Compatibility (PS) -9633 + (NN) -1535 + (LL) 1364
1D Compatibility (HY) 2400 + (ID) 800
Total energy: -16919.0 ( -26.07 by residue)
QMean score : 0.121
(partial model without unconserved sides chains):
PDB file :
Tito_4TN5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TN5-query.scw
PDB file :
Tito_Scwrl_4TN5.pdb
: