Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKKLVAWFNGLSKMWKVVVIIGAVFVVIIALTTGEDEGEQTKTKKDSNKVVKTASRPKLSTKDLALIKADLAEFEARELSSEKILKDTIKEESWSDLDFANDNI-------NQMIGTMKRYQQEILSIDAIKRSSEASADTEAFKKIFKEWSEFKIERIQVTIDLLNGKKDSEAVFKKTYPNQIIFKKVRTNKLQTALNNLKVGYELLDSQK |
| 2FYT Chain:A ((39-121)) | --------------------------------------------------------------------------------HEEMLKDKIRTESYRDFIYQNPHIFKDKVVLDVGCGT------GILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGK------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FYT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 29219 for 531 contacts (55.0/contact) +
2D Compatibility (PS) -7671 + (NN) 1779 + (LL) 10808
1D Compatibility (HY) -6400 + (ID) 1100
Total energy: 26635.0 ( 50.16 by residue)
QMean score : 0.079
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