Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIVLIASLIFIAQTCLGFFQVKYYQHHMNKVANKYAGKIGYHLYSEMERLKFRTSAVAILVVNE--NH-IVHECQILTGKTVFAQFKTFTNYHHKELSEILTELSSKNKNTIQEKAIIKTVNSCMKAL
3DCZ Chain:A ((83-136))
---------------------------------------NAY-VLSGYAPGFG--NVTVVACFIKTEDGFMLNSVRVID--------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3DCZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15534 for 156 contacts (-99.6/contact) +
2D Compatibility (PS) -3754 + (NN) 845 + (LL) 8032
1D Compatibility (HY) -2800 + (ID) 100
Total energy: -13311.0 ( -85.33 by residue)
QMean score : 0.183
(partial model without unconserved sides chains):
PDB file :
Tito_3DCZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DCZ-query.scw
PDB file :
Tito_Scwrl_3DCZ.pdb
: