Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRDGHTHTEFCPHGTHDDVEEMI---------LKAIELDFDEYSI----------VEHAPLSREFMNNTAGDKEAVTTASMAMSDLPYYFKKMNHIKKKYASDLLIHIGFEVDYLIGYEDFTRDFLDEYGPQTDDGVLSLHFLEGQGGFRSIDFSAEDYNEGIVQFYGGFEQAQLTYLEGVKQSIEADLGLFKPRRIGHISLCQKFQQFFGADTSNFSGEVMEEFQAILALVKKRDYELDFNTAGLFKSLCGETYPPKEIVTLARELKIPLVYGSDSHGVQDIGRGYNTYCQK |
| 4FNV Chain:A ((135-253)) | VKQDGGINWEYSPKDASDEYQKQLHRHQWFIPQAKAYRVSGDEKYIQSWIEVYKNWIENNPKPTTGPNTTSWWQLQVSTRIGDQVQLLEYFKNSVNFTPEWLSTFLVEFAEQADFLVDY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20475 for 559 contacts (-36.6/contact) +
2D Compatibility (PS) -10718 + (NN) -6089 + (LL) 9968
1D Compatibility (HY) -3200 + (ID) 1300
Total energy: -31814.0 ( -56.91 by residue)
QMean score : 0.294
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