Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDFHIRKATNSDAEAIQHVAITSWHHTYQDLIPGDVQDDFLERFYNVETLHNRI--SATPFAVV---EQADKVIGFANFIELE--KGKSELAAFYLLPEVTQRGLGTELLEVGMTLFHVP--LPMFVNVEKGNETAIHFYKAKGFVQVEEFTEDFYGYPLETIRFNLNHHAFEEE
3K9U Chain:A ((1-143))
MSIEIRKLSIEDLETLIEVARESWKWTYAGIYSEEYIESWIREKYSKEKLLNEIVRSQSNLDILFLGAFADSTL--IGFIELKIIANKAELLRLYLKPEYTHKKIGKTLLLEAEKIMKKKGILECRLYVHRQNSVGFSFYYKNGF------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3K9U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58561 for 880 contacts (-66.5/contact) +
2D Compatibility (PS) -14227 + (NN) -3447 + (LL) 2348
1D Compatibility (HY) -12400 + (ID) 2100
Total energy: -88387.0 ( -100.44 by residue)
QMean score : 0.401
(partial model without unconserved sides chains):
PDB file :
Tito_3K9U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K9U-query.scw
PDB file :
Tito_Scwrl_3K9U.pdb
: