Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHPIEQLLANNNTTATDIESNTRLKEGSLQKIIDKDIRTSDISLRVLSQIAIFLNTGADIIAKQLSDIEVANDLAFLIED
2PPX Chain:A ((35-92))
---IKIIRRALKLTQEEFSARYHIPLGTLRDWEQGR---SEPDQPAR-AYLKIIAVDPEGTAAAL---------------
General information:
TITO was launched using:
RESULT:
Template:
2PPX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26034 for 362 contacts (-71.9/contact) +
2D Compatibility (PS) -6363 + (NN) -2491 + (LL) 1684
1D Compatibility (HY) -400 + (ID) 350
Total energy: -33954.0 ( -93.80 by residue)
QMean score : 0.472
(partial model without unconserved sides chains):
PDB file :
Tito_2PPX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PPX-query.scw
PDB file :
Tito_Scwrl_2PPX.pdb
: