Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VAKRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAENLGTKMTTKYSDEGLLITIR--DDILFQSGSAELSAGKREIAKEIGELFAQGKGTMEGIVSGHTDNV-PISTSIYSSNWELSVARAVNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANREKNRRVEIMVRPINRDTLDEDE |
| 3KHN Chain:A ((41-164)) | ----------------------------------------------------------------------------------------------------------------------------------------------DEGV-ITLRVPSEVLFAPGAVELAPGADRVLATLKDLFIRRREQNINI-KGFTDDVQPSANARFKDNWEVSALRSVNVLRYFL--GAGIEPARLTATGLGELDPLFPNTSDENRARNRRVEFVL------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KHN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10503 for 818 contacts (-12.8/contact) +
2D Compatibility (PS) -13084 + (NN) -9412 + (LL) 12172
1D Compatibility (HY) -10000 + (ID) 2050
Total energy: -32877.0 ( -40.19 by residue)
QMean score : 0.384
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