Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFNWYKKYREEKRDYKQYKKRIAALPEDYKTAMKAIETYLWNFAKGAGMFEILKNVLEMFENAAADNLELKAVVGDDLAEFADNLLSEFPEETWMDKQRQKLRDSIK
3KFU Chain:A ((282-307))
--------------------------------------------------------------------ELGYPVGQDLSEEAERLLGEYAKERW-------------
General information:
TITO was launched using:
RESULT:
Template:
3KFU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8071 for 111 contacts (-72.7/contact) +
2D Compatibility (PS) -2758 + (NN) -389 + (LL) 7024
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -6844.0 ( -61.66 by residue)
QMean score : 0.522
(partial model without unconserved sides chains):
PDB file :
Tito_3KFU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KFU-query.scw
PDB file :
Tito_Scwrl_3KFU.pdb
: