Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VSKNVKKIVITLFALIMTVGLASGFIAPIKASADTNNFTVKVEYVDADGAEIAPSDILTDYHYVSTPKDIPGYKLREIPHNATGNITDTGIIVRYIYDKTIDVRYVDETGKDLLPVVEIINSEAAVLETISDYTFVKKDISIDGLHIIFRYKKNISTIPDFGKPNQVTVNYLDENKTPIAPSLYLSGLFNEAYNVPMKKIKGYTLLKYDSEILGVFTESPQTINIIYQKKAPEQAPSMEPLPDPTVPESPQVEKSKIKKSKIETTEKRTTSKVKIAPKALKLTKVEQKKQETKDSLPKTGDSSVNLLITCLGIIAISCGVYLLVQQSQKRRRKE |
| 2KT7 Chain:A ((38-122)) | ------------------------------------NFTVKVEYVDADGAEIAPSDTLTDYHYVSTPKDIPGYKLREIPHNATGNITDTGIIVRYIYDKIIDVSYVDETGKDLLPVVEIIN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KT7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16978 for 475 contacts (-35.7/contact) +
2D Compatibility (PS) -9418 + (NN) -3919 + (LL) 16912
1D Compatibility (HY) -12000 + (ID) 4100
Total energy: -29503.0 ( -62.11 by residue)
QMean score : 0.445
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