Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceGGIVILKRFFSYYKPYRTLFIIDFGCAVLAAILELAFPVAVNHVIDTLLPGKDFGLIITAALALLFFYILNTFMQYIVTYFGHMLGLNIETDMRRDLFSHLQKQPFGFYDNQKTGKLMSRMTTDLFEIGEVAHHGPEDIFISIMSLFGAFFLMLNINVKLAISTFILVPILTVLIV-----------YFNKRMTKVTTGIFKDLGNFNAGVENAISGVRVVQAFANEPHEKGRFKVLNQAYRKSKLMFYKVMGLSFSFNYFLMRLISL-----FALL--FGAYFTINGEISYGEFVGFILLTNVFIRPIEKINNVIESYPKGFAGFKRFLEVMDTEPAIQDEKDAKPAEAFRGDIAYNQVSFEYSDGKNVLNHINLSIKAGETVAFVGPSGAGKTTICNLLPRFYDVSAGEITIDGENIKRFTLPSLRAQIGVVQQDVFLFSGTVRENIAYGKLDASDEEIEHVVKLAHLSKVVEEMPDGLDTIIGERGVKLSGGQKQRLAIARMFLKNPPILILDEATSALDTETEQVIQASLEELAEGRTTLIIAHRLATIKHADRIIVVNETGIAETGTHDELLAQDNGAYKRLYDAQFNTI
4Q4A Chain:B ((25-593))-----LRRLLGYLRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRFDLLPRYMLILGTIYALTSLLFWLQGKIMLTLSQDVVFRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTLSIVP-LTVLITQIVSSQTRKYFYENQRV----------LGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRK-------VGTKAQIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEE-KDDPDAVELREVRGEIEFKNVWFSYDKKKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELI-QKRGFYYELFTSQYGL-


General information:
TITO was launched using:
RESULT:

Template: 4Q4A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -339062 for 3987 contacts (-85.0/contact) +
2D Compatibility (PS) -58631 + (NN) -23295 + (LL) 2284
1D Compatibility (HY) -57200 + (ID) 10900
Total energy: -486804.0 ( -122.10 by residue)
QMean score : 0.442

(partial model without unconserved sides chains):
PDB file : Tito_4Q4A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Q4A-query.scw
PDB file : Tito_Scwrl_4Q4A.pdb: