Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LKKTVGEVVAMLDSSIHVDAFRDVVITGVCFDTRQIKSGDLFVPFVGNVRDGHEFVGQAREMGAVATFWQKNVPNPPTDFPV--ILVEDTLLALQELAA-KYIQQVKPKVIAITGSNGKTTTKDIMAAIVETTYKVHYTGGNFNNHIGLPYTILTMPEDTEVAVLEMGMNHRHEIEVLSKIAKPDIAIITNIGEAHIEYLGSREEIAKAKLEITAGLNPSGILIYPHEE--TLLLGNINGDFRQLTFGKSEAAEIYPLEIRAEAEGTSFITNWEPELEIFV--PIIGEHNVFNTMAAMLAAREIGIEGEKIQSALKNMERSKSRLEWITTKSGARILNDAYNSSPTALKTVLKTFMHMDSSGKPKYLVLADMLELGDLSTKLHQESAEVLENDTIQKVFLYGDAMKAFGEVAESKIGQGKVHHFDTKESLETALLSEIKGNEWILVKGSYGMGLKDVVENLIIK |
4QDI Chain:A ((34-390)) | ----------------HKDQIPQTEIKRILTDSRHAESGDAFLALKGERFDAHNFVAQV-----VANGCQVAIVERPIDAEIAQLVVADTRLALGQLGAYRREQNAQLKVIALTGSSGKTTTKEMLGSILSRLAPTLITRGNLNNDLGVPMMLLELRKEHQYAVMELGANHQGEIDYTSKIVQPHVAGILNIGTAHLGEFGGRDGICRAKSEIYRHILPQGVAIVPQQDDFTAEIREAAKSHQIMSFG--EGGDVFATEIELLPQSANFQLH-TPQGSSFVRLPFAGEHNVQNATAAVAFALALGVSLEDIVKGLEQAQGAKGRLNFI-QKAPHLFIDDTYNANPTSMRAAAQVLLQQNGI---KVMVMGDIGELGDSSWQEHHD------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QDI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150157 for 2846 contacts (-52.8/contact) +
2D Compatibility (PS) -37978 + (NN) -18488 + (LL) 7628
1D Compatibility (HY) -16800 + (ID) 6200
Total energy: -221995.0 ( -78.00 by residue)
QMean score : 0.391
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