Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIRKIAIAALSVVVAGSLLTACGGGNSKSDDNGKTKVTFWAAPNPTQVKYWDEMAKAYEKENPDVTIEVSQMKESPSSEATIQSAIASKTAPTMSENINRSFAAQLADSKAIVPLNDVKGLD--DVVKERNMSETMDSWKFSDGNQYVLPVYSNPILFAWRLDTLKELGYDAPPKTYSEALEVGKKLKAKYPDKVLWAKGDLSDPTAWMRWFDFFPLYDAASKG---NAFVEDGK---LVADDKAGTELLTFMSEL-----------------QKNKLLLASKATDPFETGTSIMADNGPWTFPNWDEKFPELKYNENYAITAPLVPDSMVNEENVATYADSKGVVMYAQATDKEKEAAMDFLKFVYNDDKNDLKFLETTNLIPARDDATENETFTAFFKENPELEVYAANVPYSIPAMDDAKYNDIQQIIGEEAWNPIVRGEKKPTKAWSDMKKAEDGVLQE |
3QUF Chain:A ((27-324)) | --------------------------------GGKTKISFYSYFKDNQI---GEVVKGFEKKNPDITLDVQYGQDPAQYISTLQTRLAGGKPPTIF-NLTMDNRTDVMKSGAAL---DISGEDFLDGIDDTNFALFQ-----QDGKTYGMPVSAWVGAFFYNKDILKKAGYDKFPKTWDEFIEMGKKINS-------------NGSTAFLE--DFNTQIAGSFTGLLASYYGEQGKSGDLDADIWSGKS--TFTKDWTPVFKRWEAAAKAGVIPQKSVGLSADQVKQEFVSGNLGVMRSGPWDLPDLQ------KSDIDFGV-APFPAYSKEDGQWINGGPD-QGFAIASRASDKEKAAAKKFLAYL------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QUF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47791 for 2048 contacts (-23.3/contact) +
2D Compatibility (PS) -29297 + (NN) -12576 + (LL) 10116
1D Compatibility (HY) -10000 + (ID) 4350
Total energy: -93898.0 ( -45.85 by residue)
QMean score : 0.429
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