Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTFWQDMMNFFSYDNLMYWLSEYRNLGPLLAFLLPFIEAFLPFLPFIVFVVVNVNAYGLLIGFLISVIAAIAGSLCVFLLARKFGQTRFLRFISGHKQIKRVMEWIDRHGFSPIFILLVMPFTPSSAVNIVAGLSKIKVYQFILALVGGKLIKVFAISYIGYDFVDLIHQPLKLAILAVSVVILWFVGKRLEHWMSGKNLK |
2LX0 Chain:A ((20-32)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AFGFWLFKYLQKK------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2LX0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -1079 for 49 contacts (-22.0/contact) +
2D Compatibility (PS) -1114 + (NN) 2653 + (LL) 17008
1D Compatibility (HY) -800 + (ID) 100
Total energy: 16568.0 ( 338.12 by residue)
QMean score : 0.173
|
|
|