Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQAIDAILGHYSVRKFEDKDLTEEALTLLIKSAQAASTSSFVQAYSIIGITDKDIREQISAIAGNQPYTV---QTGQLFIFVADLARHHAILEEHQVDTAALETSEKWLVSVIDAALAAQNMAIAAESLGLGICF--IGGIRNDVEQIAEILDLPPYTMPLFGLTIGHPVANKEKAKPRLPQDLVYHENSYKKMNPETLAEYDKQIKTYYNERTAGKRVEGWSEQIARGLGRPSRLDLKAFLEKQHLNQK
3M5K Chain:A ((6-169))
-NQTLETILNRKSVRKYKDRPVEKEKIDKLIRAGMAAPSSRDRRPWEFIIVTD---RKALDTMAEGLPFARMLKETRQAIVVCGD----------------TIKSSNAWF---LDCSAASQNLLLAAESMGLGAVWTAVYPYPDRIEIVRKELRLPDHIMPLNVIPVGYP-MQKETPKNKYNVQQIHH---------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3M5K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106265 for 1171 contacts (-90.7/contact) +
2D Compatibility (PS) -17771 + (NN) -9465 + (LL) 6656
1D Compatibility (HY) -11600 + (ID) 2500
Total energy: -140945.0 ( -120.36 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_3M5K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3M5K-query.scw
PDB file :
Tito_Scwrl_3M5K.pdb
: