Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLGIIWGIIVVLLAVWLLGIIFHIAGGLINILLVIVLILVIWNLIQMARNKRK-
2RMZ Chain:A ((685-727))
-----------PESPKGPDILVVLLSVMGAILLIGLAALLIWKLLITIHDRKEF
General information:
TITO was launched using:
RESULT:
Template:
2RMZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18138 for 162 contacts (-112.0/contact) +
2D Compatibility (PS) -4335 + (NN) -850 + (LL) 1396
1D Compatibility (HY) -2000 + (ID) 400
Total energy: -24327.0 ( -150.17 by residue)
QMean score : 0.765
(partial model without unconserved sides chains):
PDB file :
Tito_2RMZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RMZ-query.scw
PDB file :
Tito_Scwrl_2RMZ.pdb
: