Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTINSVDTKEFLNHQVANLNVFTVKIHQIHWYMRGHNFFTLHEKMDDLYSEFGEQMDEVAERLLAIGGSPFSTLKEFLENASVEEAPYTKPKTMDQLMEDLVGTLELLRDEYQQGIELTDKEGDNVTNDMLIAFKASIDKHIWMFKAFLGKAPLE
2BJY Chain:A ((7-156))
------VDTKEFLNHQVANLNVFTVKIHQIGWYMRGHNFFTLGEKMDDLYSEFGEQMDEVAERLLAIGGSPFSTLKEFLENASVEEAPYTKPKTMDQLMEDLVGTLELLRDEYKQGIELTDKEGDDVTNDMLIAFKASIDKHIWMFKAFLGKAPLE
General information:
TITO was launched using:
RESULT:
Template:
2BJY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57423 for 1125 contacts (-51.0/contact) +
2D Compatibility (PS) -16632 + (NN) -13449 + (LL) 420
1D Compatibility (HY) -22000 + (ID) 7300
Total energy: -116384.0 ( -103.45 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_2BJY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BJY-query.scw
PDB file :
Tito_Scwrl_2BJY.pdb
: