Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLSLEGKTYVVMGVANKRSIAWAIARSLNEAGAKLVFTYADDRAKKSITELVPSLSEVNQNPLILACDVTSEEAITETFETIKDKAGKLSGLAHCIAFANKDFLTGDYLEVDRKSFLQAHEISAYSFTAVARALKHLEMLTEDASLLTLTYLGGERVVENYNIMGVAKASLDASVRYLAMDLGAIGVRVNAISAGPIRTVSARGVSGFSDSISLVEERAPLKRATQAEEVGDTAYYLFSNLSRGVTGEVIHVDSGYHIIGF
3OIG Chain:A ((1-255))
MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDR--NDSIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAAR--PMMTEGGSIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFHI---
General information:
TITO was launched using:
RESULT:
Template:
3OIG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -186720 for 2200 contacts (-84.9/contact) +
2D Compatibility (PS) -27209 + (NN) -3770 + (LL) 496
1D Compatibility (HY) -28000 + (ID) 7900
Total energy: -253103.0 ( -115.05 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_3OIG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OIG-query.scw
PDB file :
Tito_Scwrl_3OIG.pdb
: