Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKDIDWSNLGFSYIKTDKRY-ISYWKDGEWDEGALTEDNTLHISEGSTALHYGQQCFEGLKAYRCKDGSINLFRPDRNAARIQKSCERLLMPHIPTEKFIDAVMQVVRANEEFVPPYGTGATLYLRPFVIGVGDNIGVHAAPEYIFSVFCSPVGPYFKGGMAPTNFIVS-DFDRAAPNGTGAAKVGGNYAASLLPGQAAKERNFGDCIYLDPATHTKIEEVGSANF---FGITKDDKFVTP-YSPSILPSITKYSLLYLAEHRLGLEAVEGDVYIDKLD------EFKEAGACGTAAVITPIGGIQTKD-DFHVFHSETEVGPVTKRLFDELCGIQFGDVEAPEGWIYKVK |
| 3JZ6 Chain:A ((32-373)) | -------ANPGFGKYYTDHMVSIDYTVDEGWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSSARRLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSNEYRYLLIASPAGAYFKGGIKPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFVFGSGGSARLVTPELSGSLLPGITRDSLLQLATD-AGFAVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHVKHHDGEFTI--ADGQPGEITMALRDTLTGIQRGTFADTHGWMARLN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JZ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154847 for 2677 contacts (-57.8/contact) +
2D Compatibility (PS) -35206 + (NN) -11202 + (LL) 728
1D Compatibility (HY) -26800 + (ID) 7000
Total energy: -234327.0 ( -87.53 by residue)
QMean score : 0.447
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