Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFHVKQNNNLAVGEVDVYCHPDNLEEVTNIVMGIDEPTEKISVKKDGATYLLEPKAILYFEAVESKIFVYTEKEIYEIHWKLYELEEKFKDSSFFRCSKSMILNIEWIEKIAPGFHGKFEAKLFNREKVIISRQYAKVLKQKLNMGGKRK
1M9L Chain:A ((10-64))
--------------------------------------------------------AIRIFE--ERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKIS--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1M9L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7225 for 313 contacts (-23.1/contact) +
2D Compatibility (PS) -5258 + (NN) 3825 + (LL) 6368
1D Compatibility (HY) -800 + (ID) 1000
Total energy: -4090.0 ( -13.07 by residue)
QMean score : -0.282
(partial model without unconserved sides chains):
PDB file :
Tito_1M9L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1M9L-query.scw
PDB file :
Tito_Scwrl_1M9L.pdb
: