Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLEKNYKFLLWIYIFWFLGSVLLVSLHIIPPELTAVQSLFLVFTGVFAAVFFIMQYGKWLGSAITLLIFVVSTCIEWMQLSYTDEYIGSTLGGSVYGIPITMGFIWVGMVAGTHIIAREITLKINIDWIRGGIYSFIAATMVMIFEVLIEPITMQSKQLYITQNGFTILQLSDFINWWLLGLILHLMIYFILSLTDSWERLKYPDLKSEIVIVYWIIIAFFVFLSFYLDLWTSIAIIIVSNIIFTACYFFSLEKETQTKKKSE |
2RDD Chain:B ((12-30)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FGLIFYFMILRPQQKRTKE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RDD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 391 for 71 contacts (5.5/contact) +
2D Compatibility (PS) -1914 + (NN) -278 + (LL) 24448
1D Compatibility (HY) -2000 + (ID) 200
Total energy: 20447.0 ( 287.99 by residue)
QMean score : 0.034
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