Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LVIYLLAGFFLLLFIVLSFIDRRRISNGIILTMALFFSVLSVVYATFSKGNELLVSVMGTVLLLLVLLIPFFVVGIATMLIVNGRLMLKREGRKLANMLPLIIGLGILALIITWFGSILKTGSPILGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNFPRYNQDFLIVLGSGLIGGDRVPPLLASRLNRAIKFYDKQYAKKGKRATFIVSGGQGANETISEAEAMRGYLIEQGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSLFSTNNFHLFRAGIYARKAGLKSQGIGAKTALYYMPNALIREFIAITVMYKKVHMVLLGLLLLFFAFLAIIGVTFR |
| 1W8J Chain:A ((117-217)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------PIYGED-IINAYSGQNMGDMDPHIFAV----AEEAY-KQMARDERNQSIIVSGESGAGKTVSAKYAMR---------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W8J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3088 for 339 contacts (-9.1/contact) +
2D Compatibility (PS) -7345 + (NN) -7827 + (LL) 26892
1D Compatibility (HY) -2000 + (ID) 1300
Total energy: 5332.0 ( 15.73 by residue)
QMean score : 0.219
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