Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSFSKLMMAVCSGLLLVATAIGTVGYYFFSEGSWYKILIEQKIFYIPFVVFVPLTAISIGLIIGGLIGYFVKQKFESIDFSIRLLGQGDLEKKITSEEDENFLEVQQVYKQIDRLRDKMKAQTILTQKLASDRAESTGQTKEAILSEERHRIARELHDSVSQQLFAAMMLLSALNEQSEKSATPAMQKQLKMVESIVNESQSEMRALLLHLRPTQLEGKSLKTGIEQLLKELTTKLPIEVEWQIEDISLQKGIEDHLFRIVQELLSNTLRHSKAKLLEVRLVTMDNLAVMKVVDDGVGFDMDNVRQGSYGLQNMRERVAEFGGTIKIISFPGRGTSVEIKIPLVAKKDVESE |
3EHH Chain:A ((26-215)) | --------------------------------------------------------------------------------------------------------------------------------------------------EERQRMARDLVDTLGQKL-SLMGLKSDLARKLIYKDPEQAARELKSVQQTARTSLNEVRKIVSSMKGIRLKDELI--NIKQILEAADIMFIYEEEKWPENISLLN--ENILSMCLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSDDGTFKG--------HGLLGMRERLEFANGSLHIDT--ENGTKLTMAIPN--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EHH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47012 for 1313 contacts (-35.8/contact) +
2D Compatibility (PS) -20572 + (NN) -10749 + (LL) 13832
1D Compatibility (HY) -7600 + (ID) 2800
Total energy: -74901.0 ( -57.05 by residue)
QMean score : 0.459
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