Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQLLKDKFGRVHDYIRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFMELMVKFGIKKVRITGGE-----PLLRTDIVEIVRGLGAIPEIEDISITTN-AMYLAKKAEALKEAGLTRVNISLDSLHADRFKAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDDEITDFLRFTKDKDINIRFIEYMPIGHAGTSWKEKYLPLDTIFEACNEAGYEYEPVDSIRGNGPSENFRIKGAKGTFGVIHPVSAHFCDSCNRLRLTADGYIKACLYWDEEMNIRPFIQDPVKLMQLVQKAIDNKPENHEMALKLQDEVQSNKPTWRRMSQIGG |
| 4JY8 Chain:A ((61-234)) | ----------VHIRAIIEFSNVCRKNCLYCGLRRDNKNLKRYR-MTPEEIVERARLAVQFGAKTIVLQSGEDPYYMPDVISDIVKEIKKMG-------VAVTLSLGEWPREYYEKWKEAGADRYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVDDLLFLKEHDFDM--------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JY8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60734 for 1233 contacts (-49.3/contact) +
2D Compatibility (PS) -18378 + (NN) -5619 + (LL) 10128
1D Compatibility (HY) -7200 + (ID) 2100
Total energy: -83903.0 ( -68.05 by residue)
QMean score : 0.456
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