Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSKKKKIVVIGRSNLQNLYIHTVLLKKLPAEIYLID---DQAKTSVQDF-DYASYYHADVTIHSGTFNECRNADIVVFF----QEEMSNQIVSKEDNVALIIEKVKKMMATGFRGIVLVATAESNVVAALIKRFSGLSANQIITLGTMLATSYFQVEIAKLFKISPKNVHGYIIGDNAEDVIPVWSRAFLGGKPILSYLAEDQKRISAEDLQNLTKMITKIPDFPFE--NKDGCTFRFSTVTVLAELTEVILRDEARVITVGVEVKEAYGLENPVFISVPAVIGAEGVRELLELNLSDDEQKELKQIAAKTTEKLEELQLNKGGIS |
| 3WSV Chain:A ((1-315)) | MKKTSRKVVIVGTGFVGTSIAYAMINQGVANELVLIDVNQEKAEG-----LDGMAWGEKNVSVWSGTYEECQDANLVILTAGVNQKPGQTRLDLVKTNATITRQIVKEVMASGFDGIFVVASNPVDILTYLTWQESGLPASRVVGTGTTLDTTRFRKEIALKLAVDPRSVHGYILGEHGDSEVAAWSHTTVGGKPIMEYVEKDH-RLEEND---LTVLADKVKNAAYEIIDRKKATY-YGIGMSTTRIVKAILNNEQAVLPVSAYLNGEYGEED-IFTGVPSIVDENGVREIIDLSITPQEKAMFHQSVSELKAVLDTVRL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WSV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -273275 for 2581 contacts (-105.9/contact) +
2D Compatibility (PS) -32344 + (NN) -12508 + (LL) 396
1D Compatibility (HY) -20800 + (ID) 4300
Total energy: -342831.0 ( -132.83 by residue)
QMean score : 0.663
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