Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKWMVIISIISLVALLGACGNNDNEKDQEDKSTTDSTTKKAKSSSNESNKAAETKENDTNDKAATTDKGSSNPTKEEKDTSTTTDTPKKETPKSPAKTEAFSFSPSGFKVSTVESILGGDVTTTYLSSSKSFQKDFEALTLFINQYKVEHVINP-------------TKEVSASNPESYLANKNGYVITLDISIKNNSKKDKMYKADQISLLGASKSVGGSLDNFIPSGFHLIGSSSDPYNFTAGKTARGLLTFTMDEATYNDLAKDSQIGVPDPSRFDSSSTKGSSQDNVVAPFPIK |
3PNR Chain:B ((68-176)) | -------------------------------------------------------------------------------------------------------------------------------------------LWVLLGIHKDEPIINPENFPTKLTKKSFFSEEISVTQPKKY-----------------------------MQLLGGPDRMRSVIKGHKPGKYYIVYSYYRPFSPTSG----------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PNR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 758 for 307 contacts (2.5/contact) +
2D Compatibility (PS) -6557 + (NN) -147 + (LL) 9160
1D Compatibility (HY) -4800 + (ID) 900
Total energy: -2486.0 ( -8.10 by residue)
QMean score : 0.122
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