Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVKKAVIPAAGLGTRFLPATKAMPKEILPIVDKPTIQFIVEEAVASGIEDI-LIVTGKGKRAIEDHFDSVPELENNLREKNKLDLLHLVEETTNINLHFIRQSKPKGLGDAILQAKGFIGNEPFVVMLGDDIVQSKTPCAKQLIDQYEKTHSSVIGVQ-NVPREETYRYGIIDPDKEVSDRLYNVTGFVEKPNVEDAPSNLAILGRYLLTPEIFKYLETQEAGSGGEIQLTDAINRLNEIQPVFAYDFEGERFDVGDKFGFIETTLKFALKHPEIKDDVRDLIIRLGDELK |
| 2GGQ Chain:A ((2-223)) | ----KAFILAAGSGERLEPITHTRPKAFVPILSKPLIEYQIEYLRKCGIRDITVIVSSKNKEYFE----------------KKLKEISIVTQKDDI----------KGTGAAILSAKF---NDEALIIYGDLFFSNE----KEICNIITLKENAIIGVKVSNPKD----YGVL-----VLDNQNNLSKIIEKP--EIPPSNLINAGIYKLNSDIFTYLDKISISERGELELTDAINLMAKDHRVKVIEYEGYWMDIGKPWNIIDVN-KWAL--------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2GGQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -95967 for 1812 contacts (-53.0/contact) +
2D Compatibility (PS) -23509 + (NN) -6833 + (LL) 3984
1D Compatibility (HY) -18800 + (ID) 4200
Total energy: -145325.0 ( -80.20 by residue)
QMean score : 0.409
|
|
|