Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNLLVTGGAGFIGSNFVHHILNKHDDYKVVNLDLLTYAGTMSNLEDIKENPNHVFVEGNICDYDLVKKLVTDHKIDTIVNFAAESHVDRSIINPGIFIETNVQGTLNLLNVAK---------ELNVAKYLQVSTDEVYGSLGETG-YFTEETPIAPNSPYSASKASADLLVRSYFETYGLNVNITRCSNNYGPHHFPEKLIPLMITNGLDGENLPIYGDGKNIRDWLHVSDHCAAIDLVIHNGKSGEVYNVGGHNERTNNEIVHIIVDDLNL-----------SKDKIVYVEDRLGHDLRYAIDPKKIETELGWEPKYTFDTGIKETIEWYVNNEAWWRPLKSRAKLGE |
1BXK Chain:A ((3-349)) | -KILITGGAGFIGSALVRYIINETSD-AVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITF---------RYAIDASKIARELGCVPQETFESGMRKTVQWYLANESWWKQVQDGSYQGE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BXK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123339 for 2711 contacts (-45.5/contact) +
2D Compatibility (PS) -33729 + (NN) -12005 + (LL) 768
1D Compatibility (HY) -28000 + (ID) 8150
Total energy: -204455.0 ( -75.42 by residue)
QMean score : 0.490
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