Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINQVYRLVSERQFEEANIEEALTEDVVVVRPTYLSICAAD-QRYYTGSRGKEMLSKKLPMALIHEGVGQVTYDATG--EFEIGTKVVMIPNTPTEDDPVIAENYRRSSL---FRSSGYDGLMQENVFMRRDRVVRLPENMDMEVAAYSELISVAFHAITRFKQKANANQSVFGVWGDGNLGFITCLL------LKTIYPESKVIIFGKTQYKLDFF--SFVDEAHLVDEIPE----GLVIDNAFECAGGKGSQYAVEQIIDLIKPEGTISLLGVSENPIEFNSRM---VLEKGLTVFG-----SSRSGKEDFQNTVNFLSENERAVEYLSSLIGQRKVVRNLQDIIEAFETDLRNPFGKTVMEWKV |
| 4A2C Chain:A ((16-316)) | ---------------ESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNG------AHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLA-IQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETA-------GVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPL------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A2C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103612 for 2183 contacts (-47.5/contact) +
2D Compatibility (PS) -29447 + (NN) -6196 + (LL) 5480
1D Compatibility (HY) -13600 + (ID) 3550
Total energy: -150925.0 ( -69.14 by residue)
QMean score : 0.431
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