Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VEREELKAIIKQIVADKLSGAETEIPIGVSNRHIHLTETDYNQLFPNEPIQVKKWLKQPGEFAAEQTLTVVSEKGELHRVRILGPLRKFSQVELSKTDARMLGMKIPIRVSGDIEGTPGIKLVSKHSEICLPKGAIVAKRHIHLPESVANEFGVKQGDEVSVLVGSEMRSLVLNHCTIRVNNQFIPEMHIDTDEANAADIAGTNFAKIIKS |
| 2NAP Chain:A ((642-666)) | --------------------------------------------------------------------------------------------------------------------------------------------FVEINEEDAARTGIKHGDSVIVETR---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8659 for 92 contacts (-94.1/contact) +
2D Compatibility (PS) -2760 + (NN) -78 + (LL) 13724
1D Compatibility (HY) -400 + (ID) 400
Total energy: 1427.0 ( 15.51 by residue)
QMean score : 0.583
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