Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | IANTVILVDQPTLEKMKQTYLPFSNPKLPPGAVFAAKKPGVSITGYKSRKVMFQGVNGEAEAKKWVATLPESKAKAPSVSKGILPANFASKNVIGSDEVGTGDFFGPITVCAAYVDAEMMPLLKELGVKDSKAMKDPEICRIAEKIMPLVPHSVLLCPNPKYNELQKRGMNQGQMKALLHNRAIENVLKKLAPIKPEAILIDQFAEKNTYYRYLAKEPSIIREDVFFATKAEGLHLSVAAASIIARYKFVQAFDAMSKEVGIPLPKGAGPHVDAVAAEII--ERFGLETLAKYTKQHFANTEKALKMVKK |
| 3VN5 Chain:A ((29-250)) | -----------------------------PYTLWALEGNGVKVYYYKTGSLLIQGKNSEKVLKEVLNLLEKKK----------LP---------GCDESGKGDIFGSLVLCCVCIPEENYLKVSSLNPRDTKRLSDKRVERLYLALKPLVKAYCYEIKPEEYNKLYRKFRNLNKMMTHFYKLLIERVKEECG---VSEVVVDKYQPSNPF-----------GEDVIFETEAER-NLAVAVASIFARYKFLQSLKEVERELGIKIPKGTSKEVKELAKSLKNPERF------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VN5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94404 for 1651 contacts (-57.2/contact) +
2D Compatibility (PS) -24053 + (NN) -9944 + (LL) 6636
1D Compatibility (HY) -20000 + (ID) 3650
Total energy: -145415.0 ( -88.08 by residue)
QMean score : 0.530
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