Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKKKNIILISVLLGALLLLTGCSMDPSQNTDGFFSTYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKPEIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRGSSEIASHTFLWFNLGSPDMVLAIIAGLVYLAQYFVSMIGY------SPEQKKQMKI------------IGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHPEIKVMEQEEKEFEQIVEEQKKEK |
| 4DJI Chain:A ((376-439)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VIYLCAYFMLFIGYIVLVLKHPDLKRTFNIPGGKGVKLVVAIVGLLTSIMAFIVSFLPPD---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20644 for 166 contacts (-124.4/contact) +
2D Compatibility (PS) -4163 + (NN) -1820 + (LL) 20880
1D Compatibility (HY) -8000 + (ID) 900
Total energy: -14647.0 ( -88.23 by residue)
QMean score : 0.218
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